Color by
Cohorts
Patient tumor transcriptomes from the cohorts in Fig. 1e and synthetic bulks of realistic composition, mapped onto the space spanned by the directions of Ladon's representation that best predict composition and shown in two dimensions by UMAP. Color: response; predicted response (the Fig. 1e model's probability; in-sample for TransNEO); or a class's share (synthetic bulks: known; patients: Ladon's inferred share; the scale spans the shown patients' range). Choose the color and the cohorts above; hover a patient for its details.